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[Theory] | [Molecular Design] | [Database]
Theory
- Molecular Dynamics
An introduction to Molecular Dynamics
See also
GROMOS 96- Molecular Monte Carlo
- Quantum Chemistry - A Brief Review of Elementary Quantum Chemistry
(MOLFDIR, MOLSCAT,GAUSSIAN'92)
The Official Gaussian Home Page
QCPE - Quantum Chemistry Program Exchange
An introdution to Quantum Mechanics- Theory of Molecular Machines
AMBER (Assisted Model Building with Energy Refinement)
Chemistry at HARvard Macromolecular Mechanics
Molecular Mechanics(MM2&MM3, CHARMM)- Molecular Quantum Mechanics
Molecular Design
- Molecular Structure displaying Soteware RasMo
- MOLGEN - provides an efficient, portable and inexpensive tool for molecular structure elucidation in science and education
- Molscript - a program for creating molecular graphics in the form of PostScript plot files
- PovChem - Combines chemistry and raytracing to create high quality graphics of molecular models.
- Molecular Simulation Inc.
- Interactice Molecular Modeling and Molecular Dynamics
- NanoCAD, A Freeware CAD System for Nanotechnology: this is an exciting project to develop a computer program to simulate the behavior of atoms and molecules engaging in chemical reactions, particularly the controlled reactions discussed in the nanotech literature.
- Automatic Protein Model Builder
- Critical Assessment of Techniques for Protein Structure Prediction
- AMSOL
- BRAGI - a interactive protein-modelling program
- The Official DOCK WWW Page
- DCSE (Dedicated Comparative Sequence Editor)
- GCG Software Documentation (by Analysis Type) (GCG, University of Wisconsin)
- MOLMOL - MOLecule analysis and MOLecule display
- ORTEP-III - Oak Ridge Thermal Ellipsoid Plot Program for Crystal Structure Illustrations.
- Molecular Structure Databae(1)
- Molecular Structure Database(2) Idiana University Molecular structure Center
- WWW Chemical Structures Database
- Protein Database Protein Databases Inc.
- European Bioinformatics Institute (EBI)
- BioInform - The Global Bioinformatics News Service
- BioOnline (Biotechnology on the Internet)
- The Cambridge Crystallographic Data Centre
- KLOTHO - Biochemical Compound Database
- Structural Classification of Proteins - CATH
- Structural Classification of Proteins - SCOP
- The Nucleic Acid Database
- The DSSP program and database
- Comprehensive Computational Intelligence BibTeX Database
- Biocomputing Databases
- NANOTECHNOLOGY DATABASE-Sponsored by the National Science Foundation
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Last
updated: 1 July, 1998
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